Research Achievements

Sharing our achievements in global academic journals and patent registrations.

Author Annotations:
* These authors contributed equally to this work.
@ These authors are Co-correspondence.
# These authors are equal senior authors.

2026

245.

Adaptive Diversification of the Mstnb Locus Drives Genomic Architecture of Growth in Thai Clariid Catfish

Nguyen THD, P. Thammachak, T. Budi, P. Chalermwong, C. Patta, W. Jaito, T. Panthum, K. Sriphairoj, S. Hatachote, P. Srisapoome, S. Chatchaiphan, N. Muangmai, O. Sawatdichaikul, A. Antunes, K. Han, D.K. Griffin, J. Prasanpan, P. Duengkae, W. Singchat , and Srikulnath K

Evolutionary Applications, 19(9):e70324, (2026)

244.

A digital PCR-based platform for rapid assessment of chloroplast stress adaptation in microalgal metabolic engineering

Jeong J*., S. Park*, K. Srikulnath, B.S. Yu@, and K. Han@

Genes & Genomics, Online, (2026)

243.

Application-focused validation of a viability-selective PMA-qPCR assay for selected skin-associated and cosmetic-relevant bacteria

Cheon, S., J. Yoo, Y. Oh, H. Lee, D. Lee, S. Kang, C. Park, S. Mun, Y.M. Heo @, and K. Han@

Frontiers in Microbiology, 17:1873833, (2026)

242.

Effects of Dietary N-Carbamylglutamate Addition with Two Different Levels of Crude Protein (Low and High) on the Growth, Nitrogen Retention, Amino Acids in the Carcass, Blood Health, Gut Bacteria, and Meat Quality of Finishing Pigs

Kolawole UK, K.J. Lee , Y. Han, M. Kim, K. Han, D. Kang, and I.H. Kim

Animals, 16(16):2484, (2026)

241.

Adaptive signatures in Vietnamese chickens reveal a Southeast Asian reservoir for climate resilience and meat quality

Luu AH., T. Budi, W. Singchat, CTP. Nguyen, T. Panthum, N. Tanglertpaibul, K. Vangnai, A. Chaiyes, C. Yokthongwattana, C. Sinthuvanich, O. Sawatdichaikul, K. Han, N. Muangmai, DK. Griffin, P. Duengkae, NT. Nguyen, K. Srikulnath

Poultry Science, 105(11):106940, (2026)

240.

Exploring Cyclo (-Gly-Pro) for inflammation modulation in atopic dermatitis: a study on streptococcal postbiotics

Lee, H., Y. Oh, T.-W. Seo, Y.-B. Choi, S. Kim, S. Cheon, D.-G. Lee, S. Kang, K. Han, Y. M. Heo, and S. Mun

Genes & Genomics, 48(6):883-894, (2026)

239.

Evaluation of digital colorimetric analysis as an objective indicator representing microbial diversity and biological succession of dental plaque

Lim, J.-N., Y. Oh, K. Han, S. Mun, and J.-Y. Lee

Journal of Oral Microbiology, 18(1):2670840, (2026)

238.

Adaptive radiation and structural tailoring of the Vietnamese Blec2 immunogenetic reservoir

Luu, A. H., T. Budi, W. Singchat, C. Nguyen, T. Panthum, N. Tanglertpaibul, K. Vangnai, A. Chaiyes, C. Yokthongwattana, C. Sinthuvanich, O. Sawatdichaikul, K. Han, N. Muangmai, D. Griffin, P. Duengkae, T. Nguyen, and K. Srikulnath

Frontiers in Genetics, 17(N):1819401, (2026)

237.

Ancestral BG1 Alleles and Structural Conservation Ensure Immune-Related Genetic Resilience in Southeast Asian Chicken Lineages

Luu, A., T. Budi, W. Singchat, C. Nguyen, T. Panthum, N. Tanglertpaibul, K. Vangnai, A. Chaiyes, C. Yokthongwattana, C. Sinthuvanich, O. Sawatdichaikul, K. Han, N. Muangmai, D. Griffin, P. Duengkae, N. Nguyen, and K. Srikulnath

Animals, 16(9):1398, (2026)

236.

Response of gut microbiome and metabolomic profiles to POLYCAN, a β-glucan derived from Aureobasidium pullulans SM-2001 in beagles

Sampath V, K. Lee, M. Kim, YS. Kim, DH. Min, K. Han, S. Cho, D. Kang, and, IH. Kim

Journal of Animal Science and Biotechnology, 17(1):63, (2026)

235.

Alpha-defensins promote macrophage inflammatory activation via RNF31 signaling

Lee J, N. Mohammad, S. Mun, K. Han, T. Flagg-Dowie, M. Magallon, ML. Brantly, and KA. Serban

Genes & Genomics, 48(3):455-470, (2026)

234.

CST-Based Molecular Profiling of Vaginal Microbiota Validated by qRT-PCR and 16S Amplicon Sequencing

Lee, E., K. Han@, and S. Mun@

Methods, 251():83-92, (2026)

233.

Transcriptomic signatures of pregnancy progression and potential early diagnostic biomarkers in peripheral blood of Hanwoo (Bos taurus coreanae) cattle

Jeon, J., D.-Y. Oh, W. Lee, S. Mun@, and K. Han@

Genes & Genomics, 48(3):419-431, (2026)

232.

Divergent ancestry of Korean native and Thai chickens with independent gene pool retention by Korean commercial chickens

Ekerette, E., T. Budi, C. Phuoc T. Nguyen, N. Kumnan, W. Singchat, W. Wongloet, P. Chalermwong, A. H. Luu, T. Panthum, A. Chaiyes, K. Vangnai, C. Yokthongwattana, C. Sinthuvanich, N. Muangmai, P. Duengkae, D.-Y. Oh, K. Han, S. Mun, and K. Srikulnath

Animal Bioscience, 39(3):250315, (2026)

231.

Antarctic soil microbiomes as a reservoir for cosmetic bioactives: continental-scale diversity and predicted functions

Gim, G., D.-G. Lee, C. H. Park, O.-S. Kim, K. Han, Y. M. Heo, and H. Lee

Genes & Genomics, 48(2):305-315, (2026)

230.

Comprehensive in silico analysis of Acinetobacter isolates from South Korea reveals genomic diversity, antimicrobial resistance, virulence factors, and evolutionary dynamics

Islam, M. M., K. Han, K. Woo, W. S. Shin, and M. H. Oh

Genes & Genomics, 48(1):147-162, (2026)

229.

The role of Alu elements in causing BRCA1 structural variation and breast cancer susceptibility

Yu, M., D. Jo, W. Shin, and K. Han

Genes & Genomics, 48(1):1-13, (2026)

228.

A rotary-actuated compression sensor for real-time biomechanical assessment of human skin

Ahn, K., I. Kwon, J.W. Moon, K. Han@, and Y. J. Ahn@

Sensors and Actuators A: Physical, 400(N):117479, (2026)

2025

227.

Integrating miRNAs with QTL for identification of milk and reproduction related traits in dairy cattle

Shin, W., S. Mun, S. Kim, B. S. Yu, K. Srikulnath, K. Ahn, and K. Han

Genes & Genomics, 47(12):1355-1365, (2025)

226.

Effect of High-Temperature Stress on Fatty Acid Composition and Undecylprodiginine Biosynthesis in Streptomyces coelicolor M511

Han, Y., Y. Park, K. Han, and S. Mo

Microorganisms, 13(11):2520, (2025)

225.

[Book Chapter]Digital PCR Methods for Discovering Molecular Markers for Hanwoo Cattle Breed Genotyping

Kim, S., J. Jeong, S. Mun, and K. Han

Methods in Molecular Biology, 2969:155-168, (2025)

224.

Control system for soil microbes detrimental to trees using metabolites derived from algal bloom-causing microorganisms

Yu, B. S., Y. Park, S. Park, J.-W. Cho, and K. Han

Science of The Total Environment, 999(N):180359, (2025)

223.

In silico screening of epitopes as potential vaccine candidates against pathogenic Acinetobacter baumannii

Islam, M., K. Han, Y.-J. Bang, J. C. Lee, W. S. Shin, M. H. Oh

Genes & Genomics, 47(8):899-909, (2025)

222.

Epizootic shell disease induces systemic transcriptomic shifts in Homarus americanus, characterized by increased shell degradation and impaired energy metabolism across tissues

Kim, M., D. Cao, V. Cavaleri, K. Han, S. Mun@, and S. J. Jeon@

Frontiers in Physiology, 16(N):1642696, (2025)

221.

Genetic Structural Changes While Maintaining Effective Population Size of Bighead Catfish in Nong Han Lake: Implications of Metapopulation Dynamics or Release Activities

Patta, C., K. Sriphairoj, T. Budi, D. K. Quanoo, T. H. D. Nguyen, W. Jaito, P. Chalermwong, T. Pongsanarm, C. Thatukan, W. Wongloet, T. Panthum, T. Thong, P. Srikampa, W. Singchat, R. Rasoarahona, E. Kraichak, N. Muangmai, S. Chatchaiphan, S. Hatachote, A. Chaiyes, C. Jantasuriyarat, V. Chailertlit, W. Suksavate, J. Sonongbua, J. Prasanpan, S. Payungporn, K. Han, A. Antunes, P. Srisapoome, S. Dokkaew, P. Duengkae, U. Na-Nakorn, Y. Matsuda, K. Srikulnath

Fisheries Management and Ecology, 32(4):11-25, (2025)

220.

Skin microbiome-biophysical association: a first integrative approach to classifying Korean skin types and aging groups

Mun, S., H. Jo, Y. M. Heo, C. Baek, H.-B. Kim, H. Lee, K. Yun, J. Jeong, W. Lee, D. Jeon, S. M. Kang, S. Kang, Y.-B. Choi, S. Han, G. Kim, K. Ahn, D. H. Lee, Y. Ahn@, D.-G. Lee@, and K. Han@

15(N):1561590, (2025)

219.

The effects of candidate probiotic strains on the gut environment in dextran sulfate sodium-induced colitis mouse

Ahn, K., K.-W. Baek, K. Yun, Y. Oh, Y. S. Kim, E. Im, Y. Lee, J. Choi, E.-J. Song, Y.-S. Park, D. H. Lee, W. Lee, D. Y. Lee, K. Han@, and Y. J. Ahn@

Scientific Reports, 15(1):21103, (2025)

218.

Comparative Analysis of Bacteriome in Hair Follicle Layers of Patients with Female Pattern Androgenic Alopecia

Park, Y., S. Kyung, S. Mun, B. S. Yu, K. Yun, C. Baek, D. -G. Lee, S. Kang, S. R. Kim, J. -H. Kim, Y. Lee, B. -C. Park@, and K. Han@

Microorganisms, 13(6):1365, (2025)

217.

Comparison of unique Dong Tao chickens from Vietnam and Thailand: genetic background and differences for resource management

Luu, A. H., T. Budi, W. Singchat, C. P. T. Nguyen, T. Panthum, N. Tanglertpaibul, T. Thong, K. Vangnai, A. Chaiyes, C. Yokthongwattana, C. Sinthuvanich, K. Han, N. Muangmai, D. K. Griffin, M. N. Romanov, P. Duengkae, N. N. Trong, and K. Srikulnath

Genes & Genomics, 47(6):727-739, (2025)

216.

Sustainable valorization of Haematococcus pluvialis cell wall residues: Functional biomaterial development for skin health

Han, M., S. Cheon, Y. M. Heo, S. Kang, B. S. Yu@, and K. Han@

Journal of Environmental Chemical Engineering, 13(4):117393, (2025)

215.

Backtracking identification techniques for predicting unclear bacterial taxonomy at species level: molecular diagnosis-based bacterial classification

Choi, Y.*, J. Jeong*, M. Kim, S. Cha, and K. Han

Genes & Genomics, 47(5):503-508, (2025)

214.

Genetic insights for enhancing conservation strategies in captive and wild Asian elephants through improved non-invasive DNA-based individual identification

Quainoo, D. K., P. Chalermwong, P. Muangsuk, T. H. D. Nguyen, T. Panthum, W. Singchat, T. Budi, P. Duengkae, W. Suksavate, A. Chaiyes, S. Sanannu, W. Tipkantha, N. Bangkaew, S. Sripiboon, N. Muangmai, K. Han, P. Maneeorn, M. Kaewparuehaschai, G. Leamsaard, C. Kanchanasaka, K. Srikulnath

PLOS One, 20(5):e0320480, (2025)

213.

Multi-Enzyme Supplementation to Diets Containing 2 Protein Levels Affects Intramuscular Fat Content in Muscle and Modulates Cecal Microflora Without Affecting the Growth Performance of Finishing Pigs

Zhang, Q., S. Cho, J. Song, J. Jeong, M. Yu, S. Mun, K. Han@, and I. H. Kim@

Probiotics and Antimicrobial Proteins, 17(3):976-990, (2025)

212.

Shh agonist enhances maturation in homotypic Lgr5-positive inner ear organoids

Carpena, N. T., S.-Y. Chang, S. Mun, K. W. Kim, H. C. Yoon, P.-S. Chung, J.-H. Mo, J.-C. Ahn, J. O. Park, K. Han, J. E. Choi, J. Y. Jung, and M. Y. Lee

Theranostics, 15(12):5543-5565, (2025)

211.

Alpha-defensins increase NTHi binding but not engulfment by the macrophages enhancing airway inflammation in Alpha-1 antitrypsin deficiency

Lee, J., N. Mohammad, K. Han, T. Flagg-Dowie, M. Magallon, M. L. Brantly, and K. A. Serban

Frontiers in Immunology, 16(N):1543729, (2025)

210.

Aerobic bacterial group as an early-stage biomarker from faecal samples of patients with colorectal cancer without distant metastasis

Lee D., Ahn K., Yun K., Oh Y., Park Y.S., Kim Y.S., Gim J.-A., Mun S., Mun J.-W., Han K., Ahn Y.J.

Beneficial Microbes, 16(2):201-219, (2025)

209.

Exploring Competitive Relationship Between Haemophilus parainfluenzae and Mitis Streptococci via Co-Culture-Based Molecular Diagnosis and Metabolomic Assay

Choi, Y., J. Jeong, Y. Han, M. Han, B. Yu, and K. Han

Microorganisms, 13(2):279, (2025)

208.

Lonafarnib Protects Against Muscle Atrophy Induced by Dexamethasone

Bae, S., V.‐H. Mai, S. Mun, D. Dong, K. Han, S. Park, and J. K. Hyun

Journal of Cachexia, Sarcopenia and Muscle, 16(1):279, (2025)

203.

Near-stop in spermatogonia progression and reduced sperm motility in two testis forms of captive North African catfish in Kalasin, Thailand

Rey, J., W. Singchat, W. Jaito, T. Punthum, A. Lisachov, T. Pongsanarm, C. Thatukan, W. Wongloet, T. Budi, P. Chalermwong, T. Thong, P. Srikampa, E. Kraichak, A. Chaiyes, C. Jantasuriyarat, V. Chailertlit, W. Suksavate, J. Sonongbua, K. Han, P. Srisapoome, K. Sriphairoj, S. Hatachote, N. Muangmai, P. Panochit, W. Maneeaphai, A. Phuonnim, S. Sengtrakool, N. Kitana, T. Thitiphuree, P. Duengkae, J. Kitana, U. Na-Nakorn, J. Prasanpan, Y. Matsuda, and K. Srikulnath

Aquaculture, 595(2):741646, (2025)

2024

207.

Shared alleles and genetic structures in different Thai domestic cat breeds: the possible influence of common racial origins

Jaito, W.*, W. Singchat*@, C. Patta, C. Thatukan, N. Kumnan, P. Chalermwong, T. Budi, T. Panthum, W. Wongloet, P. Wattanadilokchatkun, T. Thong, N. Muangmai, K. Han, P. Duengkae , R. Phatcharakullawarawat, and K. Srikulnath@

Genomics & Informatics, 22(1):12, (2024)

206.

Retrotransposons and DNA transposons: insights into evolutionary genomics

Mun, S., and K. Han

Genes & Genomics, 46(11):1267-1269, (2024)

205.

Microalgae: a multifaceted catalyst for sustainable solutions in renewable energy, food security, and environmental management

Yu, B. S.*, S. Pyo*, J. Lee, and K. Han

Microbial Cell Factories, 23(1):308, (2024)

204.

Samae Dam chicken: a variety of the Pradu Hang Dam breed revealed from microsatellite genotyping data

Tanglertpaibul, N.,T. Budi, C. P. T. Nguyen, W. Singchat, W. Wongloet, N. Kumnan, P. Chalermwong, A. H. Luu, K. Noito, T. Panthum, P. Wattanadilokchatkun, A. Payopat, N. Klinpetch, A. Chaiyes, K. Vangnai, C. Yokthongwattana, C. Sinthuvanich, S. F. Ahmad, N. Muangmai, K. Han, M. Nunome, A. Koga, P. Duengkae, S. Waipanya, Y. Matsuda, and K. Srikulnath

Animal Bioscience, 37(12):2033-2043, (2024)

202.

Metabolome Shift in Centella asiatica Leaves Induced by the Novel Plant Growth-Promoting Rhizobacterium, Priestia megaterium HyangYak-01

Kim, M.-C., H. W. Jo, K. Lim, I. Kim, H.-B. Kim, S. Kim, Y. Nho, M. Kim, H. Kim, C. Baek, Y. M. Heo, H. Lee, S. Kang, D.-G. Lee, K. Han, and J.-H. Shin

Plants, 13(18):2636, (2024)

201.

Effect of Helicobacter pylori on sleeve gastrectomy and gastric microbiome differences in patients with obesity and diabetes

Park, Y. S., K. Ahn, K. Yun, J. Jeong, K.-W. Baek, D. J. Park, K. Han@, and Y. J. Ahn@

International Journal of Obesity, 48(11):1664-1672, (2024)

200.

Purposive breeding strategies drive genetic differentiation in Thai fighting cock breeds

Budi. T., A. H. Luu, W. Singchat, W. Wongloet, J. Rey, N. Kumnan, P. Chalermwong, C. P. T. Nguyen, T. Panthum, N. Tanglertpaibul, T. Thong, H. Ali, K. Vangnai, A. Chaiyes, C. Yokthongwattana, C. Sinthuvanich, K. Han, A. Antunes, N. Muangmai, P. Duengkae, and K. Srikulnath

Genes & Genomics, 46(10):1225-1237, (2024)

199.

Development of an Effective Microalgae Cultivation System Utilizing CO2 in the Air by Injecting CaCO3

Pyo, S., B. S. Yu, and K. Han

Energies, 17(17):4475, (2024)

198.

Characteristics of Malassezia furfur at various pH and effects of Malassezia lipids on skin cells

Park, Y.*, B. S. Yu*, Y. M. Heo, S. Kyung, K. ‑E. Lee, S. Kim, S. Kang, K. Han@, and D. H. Kim@

Applied Microbiology and Biotechnology, 108(1):455, (2024)

197.

Exploring oral bacterial compositional network in two oral disease groups using a convergent approach of NGS-molecular diagnostics

Jeong, J., K. Ahn, K. Yun, M. Kim, Y. Cho, M. Han, S. Mun, Y.‑T. Kim, K. E. Lee, M.‑Y. Kim, Y. Ahn, and K. Han

Genes & Genomics, 46(8):881-898, (2024)

196.

Genome-wide sequence divergence of satellite DNA could underlie meiotic failure in male hybrids of bighead catfish and North African catfish (Clarias, Clariidae)

Lisachov Artem, Panthum Thitipong, Dedukh Dmitrij, Singchat Worapong, Ahmad Syed Farhan, Wattanadilokcahtkun Pish, Thong Thanyapat, Srikampa Phanitada, Noito Kantika, Rasoarahona Ryan, Kraichak Ekaphan, Muangmai Narongrit, Chatchaiphan Satid, Sriphairoj Kednapat, Hatachote Sittichai, Chaiyes Aingorn, Jantasuriyarat Chatchawan, Dokkaew Sahabhop, Chailertlit Visarut, Suksavate Warong, Sonongbua Jumaporn, Prasanpan Jiraboon, Payungporn Sunchai, Han Kyudong, Antunes Agostinho, Srisapoome Prapansak, Koga Akihiko, Duengkae Prateep, Na-Nakorn Uthairat, Matsuda Yoichi, Srikulnath Kornsorn

Genomics, 116(4):110868, (2024)

195.

Optimizing Bangkaew dog breed identification using DNA technology

Patta Chananya, Singchat Worapong, Thatukan Chadaphon, Jaito Wattanawan, Kumnan Nichakorn, Chalermwong Piangjai, Panthum Thitipong, Budi Trifan, Wongloet Wongsathit, Wattanadilokchatkun Pish, Thong Thanyapat, Ahmad Syed Farhan, Muangmai Narongrit, Han Kyudong, Duengkae Prateep, Phatcharakullawarawat Rattanin, Srikulnath Kornsorn

Genes & Genomics, 46(6):659-669, (2024)

194.

Weak purifying selection in allelic diversity of the ADSL gene in indigenous and local chicken breeds and red junglefowl in Thailand

Budi, T., N. Kumnan, W. Singchat, P. Chalermwong, T. Thong, W. Wongloet, R. F. M. Toky, P. Pathomvanich, T. Panthum, P. Wattanadilokchatkun, S. F. Ahmad, N. Tanglertpaibul, K. Vangnai, A. Chaiyes, C. Yokthongwattana, C. Sinthuvanich, K. Han, N. Muangmai, A. Koga, M. Nunome, O. Sawatdichaikul, P. Duengkae, Y. Matsuda, and K. Srikulnath

Gene, 923():148587, (2024)

193.

Comparative whole genome analysis of face-derived Streptococcus infantis CX-4 unravels the functions related to skin barrier

Lee, H., D.-G. Lee, H. Jo, Y. M. Heo, C. Baek, H.-B. Kim, G. Park, S. Kang, W. Lee, S. Mun, and K. Han

Genes & Genomics, 46(4):499-510, (2024)

192.

Multilocus sequence typing and antibiotic resistance of Aeromonas isolated from freshwater fish in Hebei Province

Yu, Z., Y. Oh, S. Kim, K. Han, K. Srikulnath, Q. Li, J.-S. Jang, and H.-S. Lee

PLOS ONE, 19(3):e0298745, (2024)

191.

A Glance into the Destiny of Transcriptomic Activity, Embodied by the HOX Genes, in Neonatal and Aging Dermal Cells

Ko, D., S. Mun, M. Kim, Y.-H. Nho, D.-G. Lee, S. Kang, K. Han@, and M. Kim@

Advanced Biology, 8(4):, (2024)

190.

Research Note: Possible influence of thermal selection on patterns of HSP70 and HSP90 gene polymorphisms in Thai indigenous and local chicken breeds and red junglefowls

Budi, T., W. Singchat, N. Tanglertpaibul, T. Thong, T. Panthum, K. Noito, P. Wattanadilokchatkun, M. Jehangir, A. Chaiyes, W. Wongloet, K. Vangnai, C. Yokthongwattana, C. Sinthuvanich, S. F. Ahmad, N. Muangmai, K. Han, M. Nunome, T. Supnithi, A. Koga, P. Duengkae, Y. Matsuda, and K. Srikulnath

103(4):103503, (2024)

189.

Dietary Bacillus spp. supplementation to both sow and progenies improved post-weaning growth rate, gut function, and reduce the pro-inflammatory cytokine production in weaners challenged with Escherichia coli K88

Sampath, V., S. Cho, J. Jeong, S. Mun, C. H. Lee, R. G. Hermes, A. Taechavasonyoo, N. Smeets, S. Kirwan, K. Han@, and I. H. Kim@

Animal Microbiome, 6(1):, (2024)

188.

Genetic insights: mapping sex-specific loci in Siamese cobra (Naja kaouthia) sheds light on the putative sex determining region

Jaito, W., T. Panthum, S. F. Ahmad, W. Singchat, N. Muangmai, K. Han, A. Koga, P. Duengkae, and K. Srikulnath

Genes & Genomics, 46(1):113-119, (2024)

187.

Disclosing the hidden nucleotide sequences: a journey into DNA barcoding of raptor species in public repositories

Jaito, W., J. Sonongbua, T. Panthum, P. Wattanadilokcahtkun, N. Ariyaraphong, T. Thong, W. Singchat, S. F. Ahmad, E. Kraichak, N. Muangmai, K. Han, A. Antunes, R. Sitdhibutr, A. Koga, P. Duengkae, C. Kasorndorkbua, and K. Srikulnath

Genes & Genomics, 46(1):95-112, (2024)

186.

Skin benefits of postbiotics derived from Micrococcus luteus derived from human skin: an untapped potential for dermatological health

Heo, Y. M., D.-G. Lee, S. Mun, M. Kim, C. Baek, H. Lee, S. K. Yun, S. Kang, and K. Han

Genes & Genomics, 46(1):13-25, (2024)

2023

185.

Comparison of microbial molecular diagnosis efficiency within unstable template metagenomic DNA samples between qRT-PCR and chip-based digital PCR platforms

Kim, D., J. Jeon, M. Kim, J. Jeong, Y. M. Heo, D. -G. Lee, D. K. Yon, and K. Han

Genomics & Informatics, 21(4):e52, (2023)

184.

Genome-wide SNP analysis provides insights into the XX/XY sex-determination system in silver barb (Barbonymus gonionotus)

Chailertrit, V., T. Panthum1, L. Kongkaew, P. Chalermwong, W. Singchat, S. F. Ahmad, E. Kraichak, N. Muangmai, P. Duengkae, S. Peyachoknagul, K. Han, and Kornsorn Srikulnath

Genomics & Informatics, 21(4):e47, (2023)

183.

Marine-derived Ca-Mg complex influences lipid and glucose metabolism, serum metabolites, colostrum profile, and stress hormone in sows over four-parity periods

Cho, S., S. D. Upadhaya, W. J. Seok, S. Mun, H. Lee, R. H. v. d. Veen, K. Han@ and I. H. Kim@

Journal of Animal Science and Technology, 65(6):1308-1322, (2023)

182.

Alterations in gastric and gut microbiota following sleeve gastrectomy in high-fat diet-induced obese rats

Park, Y. S., K. Ahn, K. Yun, J. Jeong, K. ‑W. Baek,J. Lee, H. ‑H. Kim, K. Han@, and Y. J. Ahn@

Scientific Reports, 13(1):, (2023)

181.

Human Endogenous Retrovirus-K (HML-2)-Related Genetic Variation: Human Genome Diversity and Disease

Shin, W., S. Mun@, and K. Han@

Genes, 14(12):2150, (2023)

180.

Hi-C sequencing unravels dynamic three-dimensional chromatin interactions in muntjac lineage: insights from chromosome fusions in Fea’s muntjac genome

Jehangir, M., S. F. Ahmad, W. Singchat, T. Panthum, T. Thong, P. Aramsirirujiwet, A. Lisachov, N. Muangmai, K. Han, A. Koga, P. Duengkae, and K. Srikulnath

Chromosome Research, 31(4):, (2023)

179.

StringFix: an annotation-guided transcriptome assembler improves the recovery of amino acid sequences from RNA-Seq reads

Lee, L., M. Kim, K. Han, and S. Yoon

Genes & Genomics, 45(12):1599-1609, (2023)

178.

Dermatobacter hominis gen. nov., sp. nov., a new member of the family Iamiaceae, revealed the potential utilisation of skin-derived metabolites

Jo, H., C. Baek, Y. M. Heo, H.-B. Kim, H. Lee, S. Kang, S. Mun, Y. Oh, D. Ko, K. Han, R. Riesco, M. E. Trujillo, and D.-G. Lee

Antonie van Leeuwenhoek, 116(11):1139-1150, (2023)

177.

Genetic admixture and diversity in Thai domestic chickens revealed through analysis of Lao Pa Koi fighting cocks

Wattanadilokcahtkun, P., P. Chalermwong, W. Singchat, W. Wongloet, A. Chaiyes, N. Tanglertpaibul, T. Budi, T. Panthum, N. Ariyaraphong, S. F. Ahmad, A. Lisachov, N. Muangmai, M. Nunome, K. Han, Y. Matsuda, P. Duengkae, and K. Srikulnath

PLOS ONE, 18(10):e0289983, (2023)

176.

MicrosatNavigator: exploring nonrandom distribution and lineage-specificity of microsatellite repeat motifs on vertebrate sex chromosomes across 186 whole genomes

Rasoarahona, R., P. Wattanadilokchatkun, T. Panthum, K. Jaisamut, A. Lisachov, T. Thong, W. Singchat, S. F. Ahmad, K. Han, E. Kraichak, N. Muangmai, A. Koga, P. Duengkae, A. Antunes, and K. Srikulnath

Chromosome Research, 31(4):, (2023)

175.

Overcoming taxonomic challenges in DNA barcoding for improvement of identification and preservation of clariid catfish species

Chalermwong, P., T. Panthum, P. Wattanadilokcahtkun, N. Ariyaraphong, T. Thong, P. Srikampa, W. Singchat, S. F. Ahmad, K. Noito, R. Rasoarahona, A. Lisachov, H. Ali, E. Kraichak, N. Muangmai, S. Chatchaiphan, K. Sriphairoj, S. Hatachote, A. Chaiyes, C. Jantasuriyarat, V. Chailertlit, W. Suksavate, J. Sonongbua, W. Srimai, S. Payungporn, K. Han, A. Antunes, P. Srisapoome, A. Koga, P. Duengkae, Y. Matsuda, U. Na-Nakorn, K. Srikulnath

Genomics & Informatics, 21(3):e39, (2023)

174.

Optimizing Microsatellite Marker Panels for Genetic Diversity and Population Genetic Studies: An Ant Colony Algorithm Approach with Polymorphic Information Content

Rasoarahona, R., P. Wattanadilokchatkun, T. Panthum, T. Thong, W. Singchat, S. F. Ahmad, A. Chaiyes, K. Han, E. Kraichak, N. Muangmai, A. Koga, P. Duengkae, A. Antunes, and K. Srikulnath

Biology, 12(10):1280, (2023)

173.

Comparison of genetic variation between primary colorectal cancer and metastatic peritoneal cancer

Shin, W., J. Yun, K. Han@, and D. ‑G. Park@

Genes & Genomics, 45(8):989-1001, (2023)

172.

Comparison of digital PCR platforms using the molecular marker

Lee, C.-J., W. Shin, M. Song, S. -S. Shin, Y. Park, K. Srikulnath, D. H. Kim@, and K. Han@

Genomics & Informatics, 21(2):e24, (2023)

171.

Environmental and Socio–Cultural Factors Impacting the Unique Gene Pool Pattern of Mae Hong-Son Chicken

Wongloet, W., W. Singchat, A. Chaiyes, H. Ali, S. Piangporntip, N. Ariyaraphong, T. Budi, W. Thienpreecha, W. Wannakan, A. Mungmee, K. Jaisamut, T. Thong, T. Panthum, S. F. Ahmad, A. Lisachov, W. Suksavate, N. Muangmai, R. Chuenka, M. Nunome, W. Chamchumroon, K. Han, A. Nuangmek, Y. Matsuda, P. Duengkae, K. Srikulnath

Animals, 13(12):1949, (2023)

170.

Mucosal immunization with Lactiplantibacillus plantarum-displaying recombinant SARS-CoV-2 epitopes on the surface induces humoral and mucosal immune responses in mice

Hwang, I.-C., V. D. Valeriano, J. H. Song, M. Pereira, J. K. Oh, K. Han, L. Engstrand, and D. -K. Kang

Microbial Cell Factories, 22(1):, (2023)

169.

Emerging importance of bighead catfish (Clarias macrocephalus) and north African catfish (C. gariepinus) as a bioresource and their genomic perspective

Lisachova, A., D. H. M. Nguyen, T. Panthum, S. F. Ahmad, W. Singchat, J. Ponjarat, K. Jaisamut, P. Srisapoome, P. Duengkae, S. Hatachote, K. Sriphairoj, N. Muangmai, S. Unajak, K. Han, U. Na-Nakorn, and K. Srikulnath

Aquaculture, 573():739585, (2023)

168.

Thai Local Chicken Breeds, Chee Fah and Fah Luang, Originated from Chinese Black-Boned Chicken with Introgression of Red Junglefowl and Domestic Chicken Breeds

Budi, T., W. Singchat, N. Tanglertpaibul, W. Wongloet, A. Chaiyes, N. Ariyaraphong, W. Thienpreecha, W. Wannakan, A. Mungmee, T. Thong, P. Wattanadilokchatkun, T. Panthum, S. F. Ahmad, A. Lisachov, N. Muangmai, R. Chuenka, P. Prapattong, M. Nunome, W. Chamchumroon, K. Han, S. Pornpipatsiri, T. Supnithi, M. -S. Peng, J. -L. Han, Y. Matsuda, P. Duengkae, P. Noinafai, and K. Srikulnath

Sustainability, 15(8):6878, (2023)

167.

Should the Identification Guidelines for Siamese Crocodiles Be Revised? Differing Post-Occipital Scute Scale Numbers Show Phenotypic Variation Does Not Result from Hybridization with Saltwater Crocodiles

Ariyaraphong, N., W. Wongloet, P. Wattanadilokchatkun, T. Panthum, W. Singchat, T. Thong, A. Lisachov, S. F. Ahmad, N. Muangmai, K. Han, P. Duengkae, Y. Temsiripong, and K. Srikulnath

Biology, 12(4):535, (2023)

166.

Effective microbial molecular diagnosis of periodontitis-related pathogen Porphyromonas gingivalis from salivary samples using rgpA gene

Jeong, J.*, Y. Oh*, J. Jeon, D. -H. Baek, D. H. Kim, K. Srikulnath, and K. Han

Genomics & Informatics, 21(1):e13, (2023)

165.

Genome-Wide Pathway Exploration of the Epidermidibacterium keratini EPI-7T

Oh, Y., S. Mun, H.W. Jo, D. -G. Lee, Y. -B. Choi@, and K. Han@

Microorganisms, 11(4):870, (2023)

164.

Effects of fermented soybean meal supplementation on the growth performance and apparent total tract digestibility by modulating the gut microbiome of weaned piglets

Muniyappan, M., S. Shanmugam, J. H. Park, K. Han@ and, I. H. Kim@

Scientific Reports, 13(1):, (2023)

163.

Understanding the bacterial compositional network associations between oral and gut microbiome within healthy Koreans

Jeong, J.*, K. Ahn*, S. Mun, K. Yun, Y. -T. Kim, W. Jung, K. E. Lee, M. -Y. Kim, Y. Ahn@, and K. Han@

Journal of Oral Microbiology, 15(1):, (2023)

162.

Efficacy and Safety of Epidermidibacterium Keratini EPI-7 Derived Postbiotics in Skin Aging: A Prospective Clinical Study

Kim, J., Y. I. Lee, S. Mun, J. Jeong, D. -G. Lee, M. Kim, H. W. Jo, S. Lee, K. Han@, and J. H. Lee@

International Journal of Molecular Sciences, 24(5):4634, (2023)

161.

Quality control of fighting fish nucleotide sequences in public repositories reveals a dark matter of systematic taxonomic implication

Panthum, T., N. Ariyaphong, P. Wattanadilokchatkun, W. Singchat, S. F. Ahmad, E. Kraichak, S. Dokkaew, N. Muangmai, K. Han, P. Duengkae, and K. Srikulnath

Genes & Genomics, 45(2):169-181, (2023)

160.

Tributyrin and anise mixture supplementation improves growth performance, nutrient digestibility, jejunal villus height, and fecal microbiota in weaned pigs

Dang, D. X.*, H. Lee*, S. J. Lee, J. H. Song, S. Mun, K. Y. Lee, K. Han@ and I. H. Kim@

Frontiers in Veterinary Science, 10():, (2023)

159.

Asian Elephant Evolutionary Relationships: New Perspectives from Mitochondrial D-Loop Haplotype Diversity

Srikulnath, K., N. Ariyaraphong, W. Singchat, T. Panthum, A. Lisachov, S. F. Ahmad, K. Han, N. Muangmai, and P. Duengkae

Sustainability, 15(1):720, (2023)

2022

158.

Impact of artificial colostrum supplement on the growth performance and blood profile in piglets

Sampath, V., K. Han, and I. H. Kim

Animal Nutrition and Feed Technology, 22(3):665-672, (2022)

157.

Nourishing neonatal piglets with synthetic milk and Lactobacillus sp. at birth highly modifies the gut microbial communities at the post-weaning stage

Sampath, V., J. H. Song, J. Jeong, S. Mun, K. Han@, and In Ho Kim@

Frontiers in Microbiology, 13():, (2022)

156.

Human Retrotransposons and Effective Computational Detection Methods for Next-Generation Sequencing Data

Lee, H. E., J. W. Min, S. Y. Mun@, K. Han@

Life, 12(10):1583, (2022)

155.

The inflammatory signature in monocytes of Sjögren’s syndrome and systemic lupus erythematosus, revealed by the integrated Reactome and drug target analysis

Lee, K. E., S. Mun, S. Kim, W. Shin, W. Jung, J. Lee, E. Hudson, W. H. Reeves, K. Han@, and S. Cha@

Genes & Genomics, 44(10):1215-1229, (2022)

154.

Inclusion of non-toxic sulfur in the diet positively affects daily growth, serum lipid profile and meat quality in finishing pigs

Upadhaya, S. D., J. M. Ahn, K. Han, Y. M. Yang, Z. Wu, I. H. Kim

Animal Feed Science and Technology, 291():115335, (2022)

153.

The Time Sequence of Gene Expression Changes after Spinal Cord Injury

Mun, S., K. Han, J. K. Hyun

Cells, 11(14):2236, (2022)

152.

Alu RNA induces NLRP3 expression through TLR7 activation in α-1-antitrypsin–deficient macrophages

Lee, J., N. Mohammad, Y. Lu, K. Kang, K. Han and M. Brantly

JCI Insight, 7(12):e158791, (2022)

151.

Whole-exome sequencing reveals rare genetic variations in ovarian granulosa cell tumor

Kim, S., S. Kim, S. Mun, Y. Kwak, K. -S. Suh, S. -Yi Choi@, K. Han@

Bosnian Journal of Basic Medical Sciences, 22(3):403-411, (2022)

150.

Comparison of the oral microbial composition between healthy individuals and periodontitis patients in different oral sampling sites using 16S metagenome profiling

Kim, Y. -T.* , J. Jeong* , S. Mun, K. Yun, K. Han@, and S.-N. Jeong@

Journal of Periodontal & Implant Science, 52(5):394, (2022)

149.

Rapid identification of SARS-CoV-2 in the point-of-care using digital PCR-based Dr. PCR™ Di20K COVID-19 Detection Kit without viral RNA extraction

Shin, W.*, C. -J. Lee,*, Y. -M. Lee, Y. -B. Choi, S. Mun@ and K. Han@

Genes & Genomics, 44(5):617-628, (2022)

148.

Evaluation of Lactobacillus Plantarum Additive on Growth Performance, Excreta Microbiota, Nutrient Digestibility, Gas Emission, and Meat Quality in Ross308-Broilers

Sampath, V., J. H. Park, B. D. Ha, K. Han, and I. H. Kim

Brazilian Journal of Poultry Science, 24(1):, (2022)

147.

Identification of Potentially Pathogenic Variants Associated with Recurrence in Medication-Related Osteonecrosis of the Jaw (MRONJ) Patients Using Whole-Exome Sequencing

Kim, S., S. Mun, W. Shin, K. Han@, and M -Y. Kim@

Journal of Clinical Medicine, 11(8):2145, (2022)

146.

A Real-Time Detection Device for the Rapid Quantification of Skin Casual Sebum Using the Oil Red O Staining Method

Ahn, K., S. Han, K. Yun, W. Lee, D. -G. Lee, S. M. Kang, Y. -B. Choi, K. Han@, Y. J. Ahn@

Sensors, 22(8):3016, (2022)

145.

Microarray analysis of lipopolysaccharide-induced endotoxemia in the cochlea

Lee, S. -Y., S. Kim, K. Han, J. W. Choi, H. B. Chae, D. Y. Choi, S. M. Lee, M. K. Park, S. Mun@, J. -W. Koo@

Gene, 823():146347, (2022)

144.

Impact of yeast hydrolysate (Saccharomyces cerevisiae) supplementation on the growth performance, nutrient digestibility, fecal microflora, noxious gas emission, blood profile, and meat quality of finishing pigs

Sampath, V., K. Han, S. SureshKuma, and I. H. Kim

Canadian Journal of Animal Science, 102(1):98-107, (2022)

143.

Supplementing volatile-flavour herbal-extract mixture to the diet of sows and their weaned offspring improves the growth performance of weaned piglets

Dang, D. X., K. Han, and I. H. Kim

Journal of Applied Animal Nutrition, 10(1):1-5, (2022)

142.

A qRT-PCR Method Capable of Quantifying Specific Microorganisms Compared to NGS-Based Metagenome Profiling Data

Jeong, J., S. Mun, Y. Oh, C. -S. Cho, K. Yun, Y. Ahn, W. -H. Chung, M. Y. Lim, T. S. Hwang, and K. Han

10(2):324, (2022)

2021

141.

Comparative analysis of human facial skin microbiome between topical sites compared to entire face

Lee, H., J. Jeong, Y. Oh, C. Lee, S. Mun, D. Lee, H. Jo, Y. Heo, C. Bae, C. Heo, S. Kang and K. Han

Genes & Genomics, 43(12):1483-1495, (2021)

140.

Diagnostic evaluation of qRT-PCR-based kit and dPCR-based kit for COVID-19

Lee, C. ‑J., W. Shin, S. Mun, M. Yu, Y. ‑B. Choi, D. H. Kim and K. Han

Genes & Genomics, 43(11):1277-1288, (2021)

139.

Investigation of single nucleotide polymorphism in TSH-β and CaSR associated with body weight in Korean native chickens (Gray Brown)

Oh, D., J. J. Ha, J. K. Yi, D. H. Kim, S. M. Oh, S. Kim, K. Han and Y. -S. Park

Journal of Animal Reproduction and Biotechnology, 36(3):129-136, (2021)

138.

High-accuracy quantitative principle of a new compact digital PCR equipment: Lab On An Array

Lee, H., C. Lee, D. H. Kim, C. -S. Cho, W. Shin, K. Han

Genomics & Informatics, 19(3):e34, (2021)

137.

A comprehensive analysis of gorilla-specific LINE-1 retrotransposons

Jeon, S., S. Kim, M. H. Oh, W. Tang, P. Liang, and K. Han

Genes & Genomics, 43(10):1133-1141, (2021)

136.

Clinical usefulness of anti-muscarinic type 3 receptor autoantibodies in patients with primary Sjögren's syndrome

Mona, M., S. Mondello, J. Y. Hyon, W. Saleh, K. Han, H. -J. Lee, Y. -J. Ha, E, H, kang, Y. Lee, S. Cha

Clinical and Experimental Rheumatology, 39(4):795-803, (2021)

135.

Nuku, a family of primate retrocopies derived from KU70

Rowley. P., A. Ellahi, K. Han, J. Patel, and S. Sawyer

G3 Genes|Genomes|Genetics, 11(8):, (2021)

134.

Investigation of high correlation with carcass traits of SNPs of the PLCB1, C/EBPα, and TDRKH genes and the combinations of SNPs using the MDR method in the Hanwoo

Kim. S., Y.-M. Lee, D. H. Kim, J. J. Ha, J. K. Yi, D. H. Kim, D. Oh, and K. Han

Genes & Genomics, 43(8):961-973, (2021)

133.

Comparative Analysis for Genetic Characterization in Korean Native Jeju Horse

Lee, W., S. Mun, S.-Y. Choi, D.-Y. Oh, Y.-S. Park@, and K. Han@

Animals, 11(7):1924, (2021)

132.

Influence of yeast hydrolysate supplement on growth performance, nutrient digestibility, microflora, gas emission, blood profile, and meat quality in broilers

Sampath. V., K. Han, and I. H. Kim

Journal of Animal Science and Technology, 63(3):563-574, (2021)

131.

A study of transposable element-associated structural variations (TASVs) using a de novo-assembled Korean genome

Mun, S., S. Kim, W. Lee, K. Kang, T. J. Meyer, B.-G. Han@, K. Han@, and H.-S. Kim@

Experimental & Molecular Medicine, 53(4):615-630, (2021)

130.

Human Endogenous Retrovirus (HERV)-K env Gene Knockout Affects Tumorigenic Characteristics of nupr1 Gene in DLD-1 Colorectal Cancer Cells

Ko, E. -J., M. S. Ock, Y. H. Choi, J. L. Iovanna, S. Mun, K. Han, H. -S. Kim, and H. -J. Cha

International Journal of Molecular Sciences, 22(8):3941, (2021)

129.

Label-Free Electrochemical Biosensor Based on Au@MoS₂–PANI for Escherichia coli Detection

Raj, P., M. H. Oh, K. Han@ and T. Y. Lee@

Chemosensors, 9(3):49, (2021)

128.

N,N-Dimethyl-4,4′-azodianiline functionalized magnetic nanoparticles for enhanced sensitivity of nucleic acid amplification tests

Chen, F., S. Lee, K. Han@, T. Y. Lee@

Sensors and Actuators B: Chemical, 332():129461, (2021)

127.

L1 retrotransposons exploit RNA m6A modification as an evolutionary driving force

Hwang, S. -Y., H. Jung, S. Mun, S. Lee, S. C. Baek, H. C. Moon, B. Kim, Y. Choi, Y. -H. Go, W. Tang, J. Choi, J. K. Choi, H. -J. Cha, H. Y. Park, P. Liang, V. N. Kim, K. Han@, and K. Ahn@

Nature Communications, 12(1):, (2021)

126.

Role of Transposable Elements in Gene Regulation in the Human Genome

Ali, A., K. Han, and P. Liang

Life, 11(2):118, (2021)

125.

The effect of taxonomic classification by full-length 16S rRNA sequencing with a synthetic long-read technology

Jeong, J.*, K. Yun*, S. Mun, W. H. Chung, S. -Y. Choi, Y. -D. Nam, M. Y. Lim, C. P. Hong, C. H. Park, Y. J. Ahn@, and K. Han@

Scientific Reports, 11(1):, (2021)

124.

Modulation of Human Mesenchymal Stem Cells by Electrical Stimulation Using an Enzymatic Biofuel Cell

Jeon, W. -Y., S. Mun, W. Ng, K. Kang, K. Han, S. Hwang, H. -H. Kim, and J. H. Lee

Catalysts, 11(1):62, (2021)

2020

123.

The nature of triple-negative breast cancer classification and antitumoral strategies

Kim, S., D. H. Kim, W. Lee, Y. -M. Lee, S. -Y. Choi@, and K. Han@

Genomics & Informatics, 18(4):e35, (2020)

122.

Molecular subtypes of triple-negative breast cancer: understanding of subtype categories and clinical implication

Lee, Y. -M., M. H. Oh, J. H. Go, K. Han@, and S. -Y. Choi@

Genes & Genomics, 42(12):1381-1387, (2020)

121.

Alpha 1 Antitrypsin-Deficient Macrophages Have Impaired Efferocytosis of Apoptotic Neutrophils

Lee, J., Y. Lu, R. Oshins, J. West, C. G. Moneypenny, K. Han and M. Brantly

Frontiers in Immunology, 11():, (2020)

120.

A High Quality Asian Genome Assembly Identifies Features of Common Missing Regions

Kim, J., J. Sung@, K. Han@, W. Lee, S. Mun, J. Lee, K. Bahk, I. Yang, Y. -K. Bae, C. Kim, J. -I. Kim, J. Seo

Genes, 11(11):1350, (2020)

119.

AbaR is a LuxR type regulator essential for motility and the formation of biofilm and pellicle in Acinetobacter baumannii

Oh, M. H. and K. Han

Genes & Genomics, 42(11):1339-1346, (2020)

118.

A comprehensive analysis of chimpanzee (Pan Troglodytes)-specific AluYb8 element

Kim, S., D. H. Kim, H. Imai, Y. -M. Lee, K. Han

Genes & Genomics, 42(10):1207-1213, (2020)

117.

A single-tube sample preparation method based on a dual-electrostatic interaction strategy for molecular diagnosis of gram-negative bacteria

Chen,F., S. Kim, J. -H. Na, K. Han@, and T. Y. Lee@

Microchimica Acta, 187(10):, (2020)

116.

Performance comparison of fecal preservative and stock solutions for gut microbiome storage at room temperature

Park, C., K. E. Yun, J. M. Chu, J. Y. Lee, C. P. Hong, Y. D. Nam, J. Jeong, K. Han@, and, Y. J. Ahn@

Journal of Microbiology, 58(8):703-710, (2020)

115.

Differential expressions of L1-chimeric transcripts in normal and matched-cancer tissues

Kim, S., W. Shin, Y. -M. Lee, S. Mun@, and K. Han@

Analytical Biochemistry, 600():113769, (2020)

114.

Enhanced Inner-Ear Organoid Formation from Mouse Embryonic Stem Cells by Photobiomodulation

Chang, S.-Y., N. Carpena, S. Mun, J. Y. Jung, P. -S. Chung, H. Shim, K. Han, J. -C. Ahn, and M. Y. Lee

Molecular Therapy - Methods & Clinical Development, 17():556-567, (2020)

113.

Application of NanoString technologies in angioimmunoblastic T cell lymphoma

Shin, W., S. Mun, S. Choi@, and K. Han@

Genes & Genomics, 42(4):485-494, (2020)

112.

Quantitative evaluation of the molecular marker using droplet digital PCR

Shin, W.*, H. Kim,* D.-Y. Oh, D. H. Kim, and K. Han

Genomics & Informatics, 18(1):e4, (2020)

2019

111.

Genetic risk of extranodal natural killer T-cell lymphoma: a genome-wide association study in multiple populations

Lin, G. -W., International NKTCL Working Group, K. Han, S. Choi, J. -X. Bei

The Lancet Oncology, 21(2):306-316, (2019)

110.

Transposable element-mediated structural variation analysis in dog breeds using whole-genome sequencing

Kim, S., S. Mun, T. Kim, K. -H. Lee, K. Kang, J. -Y. Cho@, and K. Han@

Mammalian Genome, 30(9-10):289-300, (2019)

109.

Comparison of library construction kits for mRNA sequencing in the Illumina platform

Park, Y. -S., S. Kim, D. -G. Park, D. H. Kim, K. -W. Yoon, W. Shin@, and K. Han@

Genes & Genomics, 41(10):1233-1240, (2019)

108.

Complete genome sequence and phylogenetic analysis of nosocomial pathogen Acinetobacter nosocomialis strain NCTC 8102

Subhadra, B., M. H. Oh, B. R. Lim, J. -S. Yim, S. Surendran, D. H. Kim, K. Woo, K. Han, and C. Choi

Genes & Genomics, 41(9):1063-1075, (2019)

107.

A comprehensive analysis of the Baboon-specific full-length LINE-1 retrotransposons

Lee, W.*, M. Choi*, S. Kim, W. Tang, D. H. Kim, H. -S. Kim, P. Liang, and K. Han

Genes & Genomics, 41(7):831-837, (2019)

106.

Amelogenic transcriptome profiling in ameloblast-like cells derived from adult gingival epithelial cells

Hyun, S. -Y., S. Mun, K. -J. Kang, J. -C. Lim, S. -Y. Kim, K. Han, and Y. -J. Jang

Scientific Reports, 9(1):, (2019)

105.

A comprehensive analysis of chimpanzee (Pan troglodytes)-specific LINE-1 retrotransposons

Lee, S., W. Tang, P. Liang, and K. Han

Gene, 693():46-51, (2019)

104.

Investigation of Hanwoo-specific structural variations using whole-genome sequencing data

Park, J., W. Shin, S. Mun, D. Lim, D. -Y. Oh, M. H. Oh, Y. Bhak, J. Bhak, Y. -S. Park, and K. Han

Genes & Genomics, 41(2):233-240, (2019)

103.

Novel Discovery of LINE-1 in a Korean Individual by a Target Enrichment Method

Shin, W., S. Mun, J. Kim, D. -G. Park, S. Choi, T. Y. Lee, W. Lee, S. Cha, K. Han

Molecules and cells, 42(1):87-95., (2019)

2018

102.

MicroRNAs in Autoimmune Sjögren’s Syndrome

Cha, S.@, M. Mona, D. H. Kim, K. E. Lee, and K. Han

16(4):e19, (2018)

101.

Characterization of five completeCyrtodactylusmitogenome structures reveals low structural diversity and conservation of repeated sequences in the lineage

Areesirisuk, P., N. Muangmai, K. Kunya, W. Singchat, S. Sillapaprayoon, S. Lapbenjakul, W. Thapana, A. Kantachumpoo, S. Baicharoen, B. Rerkamnuaychoke, S. Peyachoknagul, K. Han, and K. Srikulnath

PeerJ, 6():e6121, (2018)

100.

A case of interdigitating dendritic cell sarcoma studied by whole-exome sequencing

Hong, K. H.*, S. Song*, W. Shin, K. Kang, C. -S. Cho, Y. T. Hong, K. Han@, and J. H. Moon@

Genes & Genomics, 40(12):1279-1285, (2018)

99.

A Simple Guideline to Assess the Characteristics of RNA-Seq Data

Son, K.*, S. Yu*, W. Shin, K. Han@, and K. Kang@

BioMed Research International, 2018():1-9, (2018)

98.

Mobile elements contribute to the uniqueness of human genome with 15,000 human-specific insertions and 14 Mbp sequence increase

Tang, W., S. Mun, A. Joshi, K. Han, and P. Liang

DNA Research, 25(5):521-533, (2018)

97.

Superior single nucleotide polymorphisms that contribute to two main routes of the fatty acid synthesis pathway in Korean cattle

Lee, J. -Y., J. Ha, J. Yi, J. Jang, W. Lee, Y. Lee, D. Oh@, and K. Han@

Genes & Genomics, 40(9):945-954, (2018)

96.

Simple and Low‐Cost Sampling of Cell‐Free Nucleic Acids from Blood Plasma for Rapid and Sensitive Detection of Circulating Tumor DNA

Jin, C. E., B. Koo, T. Y. Lee, K. Han, S. B. Lim, I. J. Park, and Y. Shin

Advanced Science, 5(10):, (2018)

95.

Virulence properties of uropathogenic Escherichia coli isolated from children with urinary tract infection in Korea

Kim, D. H., B. Subhadra, H. Y. Kang, K. Woo, J. Kim, Y.-J. Son, K. M. Sohn, H.-J. Kim, K. Han, M. H. Oh, and C. H. Choi

Genes & Genomics, 40(6):625-634, (2018)

94.

Complete genome sequence of uropathogenic Escherichia coli isolate UPEC 26-1

Subhadra, B., D. H. Kim, Y.-J. Son, J. Kim, K. Woo, K. M. Sohn, H.-J. Kim, K. Han, M. H. Oh, and C. H. Choi

Genes & Genomics, 40(6):643-655, (2018)

93.

KoVariome: Korean National Standard Reference Variome database of whole genomes with comprehensive SNV, indel, CNV, and SV analyses

Kim, J., J. A. Weber, S. Jho, J. Jang, J. Jun, Y. S. Cho, H.-M. Kim, H. Kim, Y. Kim, O. Chung, C. G. Kim, H. Lee, B. C. Kim, K. Han, I. Koh, K. S. Chae, S. Lee, J. S. Edwards, and J. Bhak

Scientific Reports, 8(1):, (2018)

92.

Rapid and sensitive detection of Salmonella based on microfluidic enrichment with a label-free nanobiosensing platform

Dao, T., J. Yoon, C. E. Jin, B. Koo, K. Han, Y. Shin, and T. Y. Lee

Sensors and Actuators B: Chemical, 262():588-594, (2018)

91.

Temperature-dependent immune response of olive flounder (Paralichthys olivaceus) infected with viral hemorrhagic septicemia virus (VHSV)

Hwang, J. Y., K. Markkandan, K. Han, M. G. Kown, J. S. Seo, S.-i. Yoo, S. D. Hwang, B. Y. Ji, M.-H. Son, and J.-h. Park

Genes & Genomics, 40(3):315-320, (2018)

90.

In vivo evidence on the functional variation within fatty acid synthase gene associated with lipid metabolism in bovine longissimus dorsi muscle tissue

Oh, D.-Y., I. Nam, S. Hwang, H. Kong, H. Lee, J. Ha, M. Baik, M. H. Oh, S. Kim, K. Han@, and Y. Lee@

Genes & Genomics, 40(3):289-294, (2018)

89.

An efficient and tunable parameter to improve variant calling for whole genome and exome sequencing data

Ahn, Y. J., K. Markkandan, I.-P. Baek, S. Mun, W. Lee, H.-S. Kim and K. Han

Genes & Genomics, 40(1):39-47, (2018)

88.

Accurate, predictable, repeatable micro-assembly technology for polymer, microfluidic modules

Lee, T. Y., K. Han, D. O. Barrett, S. Park, S. A. Soper, and M. C. Murphy

Sensors and Actuators B: Chemical, 254():1249-1258, (2018)

2017

87.

Human Primary Epithelial Cells Acquire an Epithelial-Mesenchymal-Transition Phenotype during Long-Term Infection by the Oral Opportunistic Pathogen, Porphyromonas gingivalis

Lee, J., J. S. Roberts, K. R. Atanasova, N. Chowdhury, K. Han, and Ö. Yilmaz

Frontiers in Cellular and Infection Microbiology, 7():, (2017)

86.

Targeted next-generation sequencing for identifying genes related to horse temperament

Song, S., D.-Y. Oh, G.-J. Cho, D. H. Kim, Y.-S. Park and K. Han

Genes & Genomics, 39(12):1325-1333, (2017)

85.

Comprehensive Transcriptome Profiling of Balding and Non-Balding Scalps in Trichorhinophalangeal Syndrome Type I Patient

Kim, Y.-J., B. Yoon, K. Han and B. C. Park

Annals of Dermatology, 29(5):597, (2017)

84.

Structural variations generated by simian foamy virus-like (SFV) in Crocodylus siamensis

Panupon, T.*, S. Kim*, S. Kornsorn and K. Han

Genes & Genomics, 39(10):1129-1138, (2017)

83.

The Whole-Genome and Transcriptome of the Manila Clam (Ruditapes philippinarum)

Mun, S., Y.-J. Kim, K. Markkandan, W. Shin, S. Oh, J. Woo, J. Yoo, H. An and K. Han

Genome Biology and Evolution, 9(6):1487-1498, (2017)

82.

Whole-exome sequencing in Tricho-rhino-phalangeal syndrome (TRPS) type I in a Korean family

Yoon, B., Y.-J. Kim, S.-Y. Son, K. Han@ and B. C. Park@

Genes & Genomics, 39(4):417-422, (2017)

81.

Chicken (Gallus gallus) endogenous retrovirus generates genomic variations in the chicken genome

Lee, J., S. Mun, D.H. Kim, C. Cho, D.-Y. Oh and K. Han

Mobile DNA, 8(1):, (2017)

2016

80.

Mutational Analysis of Extranodal NK/T-Cell Lymphoma Using Targeted Sequencing with a Comprehensive Cancer Panel

Choi, S., J. H. Go, E. K. Kim, H. Lee, W. M. Lee, C.-S. Cho and K. Han

Genomics & Informatics, 14(3):78, (2016)

79.

Structural Variation ofAluElement and Human Disease

Kim, S., C.-S. Cho, K. Han and J. Lee

Genomics & Informatics, 14(3):70, (2016)

78.

An adaptive detection method for fetal chromosomal aneuploidy using cell-free DNA from 447 Korean women

Kim, S., H. J. Jung, S. H. Han, S. J. Lee, J. S. Kwon, M. G. Kim, H. Chu, H. Chen, K. Han, H. Kwak, S. Park, H. J. Joo, K. Min, M. Jeong, B. C, Kim, J. Bhak

BMC Medical Genomics, 9(1):, (2016)

77.

A Genome-Wide Methylation Approach Identifies a New Hypermethylated Gene Panel in Ulcerative Colitis

Kang, K., J.-H. Bae, K. Han, E. S. Kim, T.-O. Kim and J. M. Yi

International Journal of Molecular Sciences, 17(8):1291, (2016)

76.

Modulation of LINE-1 retrotransposition by a human SAMHD1 polymorphism

White, T. E., A. Brandariz-Nuñez, K. Han, S. L. Sawyer, B. Kim and F. Diaz-Griffero

Virology Reports, 6():53-60, (2016)

75.

Comparison of two high-throughput semiconductor chip sequencing platforms in noninvasive prenatal testing for Down syndrome in early pregnancy

Kim, S., H. J. Jung, S. H. Han, S. J. Lee, J. S. Kwon, M. G. Kim, H. Chu, H. Chen, K. Han, H. Kwak, S. Park, H. J. Joo, B. C. Kim, J. Bhak

BMC Medical Genomics, 9(1):, (2016)

74.

Whole Genome Re-Sequencing of Three Domesticated Chicken Breeds

Oh, D., B. Son , B. Kim, S. Mun, M.H. Oh, S. Oh, J. Ha, J. Yi, S. Lee and K. Han

Zoological Science, 33(1):73, (2016)

73.

Identification of transposable element-mediated deletions in 27 Korean individuals based on whole genome sequencing data

Ha, J.*, W. Lee*, S. Mun, Y.-J. Kim and K. Han

Genes & Genomics, 38(2):179-192, (2016)

72.

Analysis of L1-chimeric transcripts derived from bidirectional promoter of human-specific L1

Kim, S., Y.-J. Kim and K. Han

Genes & Genomics, 38(1):69-79, (2016)

71.

Relationship between Single Nucleotide Polymorphisms in the Peroxisome Proliferator-Activated Receptor Gamma Gene and Fatty Acid Composition in Korean Native Cattle

Lee, J.-Y., , J.-J. Ha, Y.-S. Park, J.-K. Yi, S. Lee, S. Mun, K. Han, J.-J. Kim, H.-J. Kim and D.-Y. Oh

Asian-Australasian Journal of Animal Sciences, 29(2):184-194, (2016)

2015

70.

Dynamic changes in host gene expression associated with H5N8 avian influenza virus infection in mice

Park, S.-J., M. Kumar, H.-i. Kwon, R.-K. Seong, K. Han, J.-m. Song, C.-J. Kim, Y.-K. Choi and O. S. Shin

5(1):, (2015)

69.

The first whole genome and transcriptome of the cinereous vulture reveals adaptation in the gastric and immune defense systems and possible convergent evolution between the Old and New World vultures

Chung, O., S. Jin, Y. S. Cho, J. Lim, H. Kim, S. Jho, H.-M. Kim, J. H. Jun, H. J. Lee, A. Chon, J. Ko, J. Edwards, J. A Weber, K. Han, S. J O'Brien, A. Manica, J. Bhak and W. K. Pa다

Genome Biology, 16(1):, (2015)

68.

Gene structure variation in segmental duplication block C of human chromosome 7q 11.23 during primate evolution

Kim, Y.-J., K. Ahn, J.-A. Gim, M. H. Oh, K. Han and H.-S. Kim

Gene, 573(2):285-295, (2015)

67.

Identification and expression analysis of human endogenous retrovirus Y (HERV-Y) in various human tissues

Gim, J.-A., K. Han and H.-S. Kim

Archives of Virology, 160(9):2161-2168, (2015)

66.

Meeting report: The biology of genomes and proteomes

Han, K., H. J. Jin, H.-S. Kim and N.-S. Kim

Genes & Genomics, 37(7):567-570, (2015)

65.

Simple Method for Markerless Gene Deletion in Multidrug-Resistant Acinetobacter baumannii

Oh, M. H., J. C. Lee, J. Kim, C. H. Choi and K. Han

Applied and Environmental Microbiology, 81(10):3357-3368, (2015)

64.

Genome-Wide Analysis of DNA Methylation before-and after Exercise in the Thoroughbred Horse with MeDIP-Seq

Gim, J.-A., C. P. Hong, D.-S. Kim, J.-W. Moon, Y. Choi, J. Eo, Y.-J. Kwon, J.-R. Lee, Y.-D. Jung, J.-H. Bae, B.-H Choi, J. Ko, S. Song, K. Ahn, H.-S. Ha, Y. M. Yang, H.-K. Lee, K.-D. Park, K.-T. Do, K. Han, J. M. Yi, H.-J. Cha, S. Ayarpadikannan, B.-W. Cho, J. Bhak and H.-S. Kim

Molecules and Cells, 38(3):210-220, (2015)

63.

Genome-wide target site triplication of Alu elements in the human genome

Lee, W., S. Mun, K. Kang, L. Hennighausen and K. Han

Gene, 561(2):283-291, (2015)

61.

An automated analysis pipeline for a large set of ChIP-seq data: AutoChIP

Kim, T., W. Lee, K. Han and K. Kang

37(3):305-311, (2015)

60.

Transposable element-driven transcript diversification and its relevance to genetic disorders

Ayarpadikannan, S., H.-E Lee, K. Han and H.-S. Kim

Gene, 558(2):187-194, (2015)

59.

Evolutionary fate of SVA2 elements in primate genomes

Kwak, Y., Y.-J. Kim, J. Xing and K. Han

Genes & Genomics, 37(2):153-159, (2015)

58.

TE composition of human long noncoding RNAs and their expression patterns in human tissues

Kang, D., Y.-J. Kim, K. Hong and K. Han

Genes & Genomics, 37(1):87-95, (2015)

57.

Identification of human-specific AluS elements through comparative genomics

Lee, J., S. Mun, Y.-J. Kim, H.-S. Kim and K. Han

Gene, 555(2):208-216, (2015)

2014

62.

Endogenous retrovirus-mediated genomic variations in chimpanzees

Kim, Y.-J and K.Han

Mobile Genetic Elements, 4(6):1-4, (2014)

56.

Whole genome sequence and analysis of the Marwari horse breed and its genetic origin

Jun, J., Y. S. Cho, H. Hu, H.-M. Kim, S. Jho, P. Gadhvi, K. M. Park, J. Lim, W. K. Paek, K. Han, A. Manica, J. Edwards and J. Bhak

BMC Genomics, 15(S9):, (2014)

55.

Comparative study of different molecular methods for typing of Acinetobacter baumannii clinical isolates from University Hospitals

Seo, I., J. W. Lee, S.-Y. Son and K. Han

Genes & Genomics, 36(5):551-558, (2014)

54.

Genome-wide analysis of DNA methylation patterns in horse

Lee, J.-R., C. P. Hong, J.-W. Moon, Y.-D Jung, D.-S. Kim, T.-H. Kim, J.-A. Gim, J.-H. Bae, Y. Choi, J. Eo, Y.-J. Kwon, S. Song, Y. M. Yang, H.-K. Lee, K.-D. Park, K. Ahn, K.-T. Do, H.-S. Ha, K. Han, J. M. Yi, H.-J. Cha, B.-W. Cho, J. Bhak and H.-S. Kim

BMC Genomics, 15(1):, (2014)

53.

Genome‐Wide Copy Number Variation Analysis Identifies Deletion Variants Associated With Ankylosing Spondylitis

Jung, S.-H., S.-H. Yim, H.-J. Hu, K. H. Lee, J.-H. Lee, D.-H. Sheen, M.-K. Lim, S.-Y. Kim, S.-W. Park, S.-H. Kim, K. Han, T.-H. Kim, S.-C. Shim and Y.-J. Chung

Arthritis & Rheumatology, 66(8):2103-2112, (2014)

52.

Chimpanzee-Specific Endogenous Retrovirus Generates Genomic Variations in the Chimpanzee Genome

Mun, S., J. Lee, Y.-J. Kim, H.-S. Kim and K. Han

PLoS ONE, 9(7):e101195, (2014)

51.

Mucilaginibacter koreensis sp. nov., isolated from leaf mould

Park, C. S., K. Han and T.-Y. Ahn

International Journal of Systematic and Evolutionary Microbiology, 64(Pt_7):2274-2279, (2014)

50.

BLAT-Based Comparative Analysis for Transposable Elements: BLATCAT

Lee, S., S. Oh, K. Kang and K. Han

BioMed Research International, 2014():1-7, (2014)

2013

49.

Phylogeny of Flavobacteria Group Isolated from Freshwater Using Multilocus Sequencing Analysis

Mun, S., J. Lee, S. Lee, K. Han, and T.-Y. Ahn

Genomics & Informatics, 11(4):272, (2013)

48.

Septicemia Caused by Leuconostoc lactis with Intrinsic Resistance to Vancomycin in a Patient with Biliary Stent

Shin, K. S., K. Han and S. B. Hong

Biomedical Science Letters, 19(3):280-283, (2013)

47.

Meeting report: Frontiers in genetics: genomics and epigenomics

Han, K., C. G. Kim, N.-S. Kim

Genes & Genomics, 35(5):559-562, (2013)

46.

Identification and characterization of transposable elements inserted into the coding sequences of horse genes

Ahn, K., J.-H. Bae, J.-A. Gim, J.-R. Lee, Y.-D. Jung, K.-D. Park, K. Han, B.-W. Cho & H.-S. Kim

Genes & Genomics, 35(4):483-489, (2013)

45.

DNA methylation of mobile genetic elements in human cancers

Han, K., J. Lee, H.-S. Kim, K. Yang and J. M. Yi

Genes & Genomics, 35(3):265-271, (2013)

44.

Co-existence of blaOXA-23 and armA in multidrug-resistant Acinetobacter baumannii isolated from a hospital in South Korea

Hong, S. B.*, K. S. Shin*, J. Ha and K. Han

Journal of Medical Microbiology, 62(6):836-844, (2013)

43.

Human-Specific HERV-K Insertion Causes Genomic Variations in the Human Genome

Shin, W., J. Lee, S.-Y. Son, K. Ahn, H.-S. Kim and K. Han

PLoS ONE, 8(4):e60605, (2013)

42.

The novel MER transposon-derived miRNAs in human genome

Ahn, K., J.-A. Gim, H.-S. Ha, K. Han and H.-S. Kim

Gene, 512(2):422-428, (2013)

2012

41.

Transposable Elements: No More 'Junk DNA'

Kim, Y.-J, J. Lee and K. Han

Genomics & Informatics, 10(4):226, (2012)

40.

Flavobacterium dankookense sp. nov., isolated from a freshwater reservoir, and emended descriptions of Flavobacterium cheonanense , F. chungnamense , F. koreense and F. aquatile

Lee, S., H.-Y, Weon, K. Han and T.-Y. Ahn

International Journal of Systematic and Evolutionary Microbiology, 62(Pt_10):2378-2382, (2012)

39.

mRNA sequence analysis and quantitative expression of the ADAMTS4 gene in the thoroughbred horse

Moon, J.-W, K. Ahn, J.-H. Bae, G.-H. Nam, B.-W. Cho, K.-D. Park, H.-K. Lee, Y.-M. Yang, T.-H. Kim, H.-H. Seong, K. Han and H.-S. Kim

Genes & Genomics, 34(4):441-445, (2012)

38.

UniPrimer: A Web-Based Primer Design Tool for Comparative Analyses of Primate Genomes

Nomin, B., J. Lee, J. Lee, S. B. Hong, S. Oh@ and K. Han@

Comparative and Functional Genomics, 2012():1-8, (2012)

37.

Human Genomic Deletions Generated by SVA-Associated Events

Lee, J., J. Ha, S.-Y. Son and K. Han

Comparative and Functional Genomics, 2012():1-7, (2012)

36.

In vitro CpG methylation and garcinol reduce PERV LTR promoter activity

Ha, H.-S., Y.-C. Lee, S.-J. Park, Y.-D. Jung, K. Ahn, J.-W. Moon, K. Han, K.-B. Oh, T.-H. Kim, H.-H. Seong and H.-S. Kim

Genes & Genomics, 34(2):217-222, (2012)

35.

First case of Nocardia nova spinal abscess in an immunocompetent patient

Hong, S. B., K. Han, B. R. Son, K. S. Shin and B. C. Rim

The Brazilian Journal of Infectious Diseases, 16(2):196-199, (2012)

34.

Arenimonas aquaticum sp. nov., a member of the gammaproteobacterium, isolated from a freshwater reservoir

Kim, A.-R., S. Lee, K. Han and T.-Y. Ahn

The Journal of Microbiology, 50(2):354-358, (2012)

33.

Identification of ORF sequences and exercise-induced expression change in thoroughbred horse OXCT1 gene

Nam, K.-H., K. Ahn, J.-H. Bae, B.-W. Cho, K.-D. Park, H.-K. Lee, Y.-M. Yang, T.-H. Kim, H.-H. Seong, K. Han and H.-S. Kim

Gene, 496(1):45-48, (2012)

32.

High Levels of Sequence Diversity in the 5′ UTRs of Human-Specific L1 Elements

Lee, J., S. Mun, T. J. Meyer and K. Han

Comparative and Functional Genomics, 2012():1-8, (2012)

2011

31.

Development of GEBRET: a web-based analysis tool for retroelements in primate genomes

Ha, H.-S., W.-K. Chung, K. Ahn, J.-H. Bae, S.-J. Park, J.-W. Moon, K.-H. Nam, K. Han, H.-G. Cho and H.-S. Kim

Genes & Genomics, 33(6):679-684, (2011)

30.

Evolutionary diversification of DYX1C1 transcripts via an HERV-H LTR integration event

Kim, Y.-J, J.-W. Huh, D.-S. Kim, K. Han and H.-S. Kim

Genes & Genetic Systems, 86(4):277-284, (2011)

29.

Quantitative analysis of transcript variants of CHM gene containing LTR12C element in humans

Jung, Y.-D., J.-W. Huh, D.-S. Kim, Y.-J. Kim, K. Ahn, H.-S. Ha, J.-R. Lee, J.-M. Lee, J.-W. Moon, T.-O. Kim, G.-A. Song, K. Han and H.-S. Kim

Gene, 489(1):1-5, (2011)

28.

Identification of a Genomic Reservoir for New TRIM Genes in Primate Genomes

Han, K.*, D. I. Lou*, S. L. Sawyer

PLoS Genetics, 7(12):e1002388, (2011)

27.

Alu pair exclusions in the human genome

Cook. G. W., M. K. Konkel, J. D. Major III, J. A. Walker, K. Han and M. A. Batzer

Mobile DNA, 2(1):, (2011)

26.

Transcriptional variations mediated by an alternative promoter of the FPR3 gene

Ha, H.-S., J.-W. Huh, J.-A. Gim, K. Han and H.-S. Kim

Mammalian Genome, 22(9-10):621-633, (2011)

25.

Quantitative analysis of the HERV pol gene in human tissues

Ahn, K., K. Han and H.-S. Kim

Genes & Genomics, 33(4):439-443, (2011)

24.

A vertically stacked, polymer, microfluidic point mutation analyzer: Rapid high accuracy detection of low-abundance K-ras mutations

Han, K.*, T. Y. Lee*, D. E. Nikitopoulos, S. A. Soper and M. C. Murphy

Analytical Biochemistry, 417(2):211-219, (2011)

23.

Characterization ofAcinetobacter baumanniiCo-producing Carbapenemases OXA-23 and OXA-66, andarmA16S Ribosomal RNA Methylase at a University Hospital in South Korea

Jeong, H. W., B. R. Son, D. I. Shin, D. Ryu, S. B. Hong, K. Han and K. S. Shin

Korean Journal of Clinical Microbiology, 14(2):67, (2011)

22.

Genomic Structure and Expression Analyses of the PYGM Gene in the Thoroughbred Horse

Nam, K.-H., K. Ahn, J.-H. Bae, K. Han, C.-E. Lee, K.-D. Park, S.-H. Lee, B.-W. Cho and H.-S. Kim

Zoological Science, 28(4):276, (2011)

2010

21.

[Book Chapter]Laboratory Methods for the Analysis of Primate Mobile Elements

Ray, D. A., K. Han, J. A. Walker and M. A. Batzer

Methods in Molecular Biology, 153-179, (2010)

2009

20.

Phylogeny of the macaques (Cercopithecidae: Macaca) based on Alu elements

Li, Jing, K. Han, J. Xing, H.-S. Kim, J. Rogers, O. A. Ryder, T. Disotell, B. Yue and M. A. Batzer

Gene, 448(2):242-249, (2009)

19.

Distribution of Four HIV Type 1-Resistance Polymorphisms ( CCR5 -Δ 32 , CCR5-m303 , CCR2-64I, and SDF1-3′A ) in the Bahraini Population

Salem, A.-H., E. Farid, R. Fadel, M. Abu-Hijleh, W. Almawi, K. Han and M. A. Batzer

AIDS Research and Human Retroviruses, 25(10):973-977, (2009)

18.

Mobile elements create structural variation: Analysis of a complete human genome

Xing, J., Y. Zhang, K. Han, A.-H. Salem, S. K. Sen, C. D. Huff, Q. Zhou, E. F. Kirkness, S. Levy, M. A. Batzer and L. B. Jorde

Genome Research, 19(9):1516-1526, (2009)

17.

Allele frequencies of the human platelet antigen-1 in the Egyptian population

Salem, A.-H., K. Han and M. A. Batzer

BMC Research Notes, 2(1):90, (2009)

2008

16.

Chromosomal Inversions between Human and Chimpanzee Lineages Caused by Retrotransposons

Lee, J., K. Han, T. J. Meyer, H.-S. Kim and M. A. Batzer

3(12):e4047, (2008)

15.

L1 recombination-associated deletions generate human genomic variation

Han, K., J. Lee, T. J. Meyer, P. Remedios, L. Goodwin and M. A. Batzer

Proceedings of the National Academy of Sciences, 105(49):19366-19371, (2008)

2007

14.

Alu Recombination-Mediated Structural Deletions in the Chimpanzee Genome

Han, K.*, J. Lee*, T. J. Meyer, J. Wang, S. K. Sen, D. Srikanta, P. Liang and M. A. Batzer

PLoS Genetics, 3(10):e184, (2007)

13.

Endonuclease-independent insertion provides an alternative pathway for L1 retrotransposition in the human genome

Sen, S. K., C. T. Huang, K. Han and M. A. Batzer

Nucleic Acids Research, 35(11):3741-3751, (2007)

12.

Mobile DNA in Old World Monkeys: A Glimpse Through the Rhesus Macaque Genome

Han, K.*, M. Konkel*, J. Xing*, H. Wang*, J. Lee, T. J. Meyer, C. T. Huang, E. Sandifer, K. Hebert, E. W. Barnes, A. F. A. Smit, B. Ullmer and M. A. Batzer

Science, 316(5822):238-240, (2007)

11.

Evolutionary and Biomedical Insights from the Rhesus Macaque Genome

Rhesus Macaque Genome Sequencing and Analysis Consortium

Science, 316(5822):222-234, (2007)

10.

Different evolutionary fates of recently integrated human and chimpanzee LINE-1 retrotransposons

Han, K.*, Lee, J.*, R. Cordaux*, J. Wang, D. J. Hedges, P. Liang# and M. A. Batzer#

Gene, 390(1-2):18-27, (2007)

2006

9.

Human Genomic Deletions Mediated by Recombination between Alu Elements

Han, K.*, Sen, S. K.*, J. Wang, J. Lee, H. Wang, P. A. Callinan, M. Dyer, R. Cordaux, P. Liang and M. A. Batzer

The American Journal of Human Genetics, 79(1):41-53, (2006)

2005

8.

SVA Elements: A Hominid-specific Retroposon Family

Wang, H.*, J. Xing*, D. Grover*, D. J. Hedges, K. Han, J. A. Walker and M. A. Batzer

Journal of Molecular Biology, 354(4):994-1007, (2005)

7.

A mobile element based phylogeny of Old World monkeys

Xing, J., H. Wang, K. Han, D. A. Ray, C. H. Huang, L. G. Chemnick, C.-B. Stewart, T. Disotell, O. A. Ryder and M. A. Batzer

Molecular Phylogenetics and Evolution, 37(3):872-880, (2005)

6.

Imipenem-resistant Achromobacter xylosoxidans carrying blaVIM-2-containing class 1 integron

Shin, K. S., K. Han, J. Lee, S. B. Hong, B. R. Son, S. J. Youn, J. Kim, H. S. Shin

Diagnostic Microbiology and Infectious Disease, 53(3):215-220, (2005)

5.

Genomic rearrangements by LINE-1 insertion-mediated deletion in the human and chimpanzee lineages

Han K.

Nucleic Acids Research, 33(13):4040-4052, (2005)

4.

Under the genomic radar: The Stealth model of Alu amplification

Han, K.*, J. Xing*, H. Wang, D. J. Hedges, R. K. Garber, R. Cordaux and M. A. Batzer

Genome Research, 15(5):655-664, (2005)

2004

3.

Alu Element Mutation Spectra: Molecular Clocks and the Effect of DNA Methylation

Xing, J., D. J. Hedges, K. Han, H. Wang, R. Cordaux and M. A. Batzer

Journal of Molecular Biology, 344(3):675-682, (2004)

2003

2.

Phylogenetic Analysis of Phenanthrene-Degrading Sphingomonas.

Han, K., Y. T. Jung, and S. Y. Son

Journal of Microbiology and Biotechnology, 13: 942-948, (2003)

1.

solation and Characterization of PAHs Degrading Sphingomonas sp. K-19.

Han, K., S. H. Kim, and S. Y. Son

The Korean Journal of Microbiology, 39: 288-292, (2003)

Patents

17.

덱스트로메토르판을 유효성분으로 포함하는 신경 질환 예방 또는 치료용 약학 조성물

출원번호: 10-2025-0011565출원일: 2025-01-24
18.

구강질환 유발 세균 검출용 조성물 및 이의 용도

출원번호: 10-2022-0167620출원일: 2022-12-05등록번호: 10-2896598-0000등록일: 2025-12-02
14.

프로카인을 유효성분으로 포함하는 신경 질환 예방 또는 치료용 약학 조성물

출원번호: 10-2024-0016599출원일: 2024-02-02
15.

한국 재래 돼지 품종 식별용 SNP 마커, 조성물 및 이를 이용한 식별 방법

출원번호: 10-2024-0042598출원일: 2024-03-28
16.

발프로산을 유효성분으로 포함하는 신경 질환 예방 또는 치료용 약학 조성물

출원번호: 10-2024-0016600출원일: 2024-02-02
10.

스타필로코커스 아우레우스에 특이적인 프라이머 또는 프로브를 포함하는 황색포도상구균 감염증 진단용 조성물

출원번호: 10-2023-0163749출원일: 2023-11-22
11.

비피더스 균주의 정량을 위한 프라이머 세트 및 이의 용도

출원번호: 10-2021-0107487출원일: 2021-08-13등록번호: 10-2597907-0000등록일: 2023-10-31
12.

박테로이데스 균주의 정량을 위한 프라이머 세트 및 이의 용도

출원번호: 10-2021-0107486출원일: 2021-08-13등록번호: 10-2597906-0000등록일: 2023-10-31
13.

아커만시아 균주의 정량을 위한 프라이머 세트 및 이의 용도

출원번호: 10-2021-0107485출원일: 2021-08-13등록번호: 10-2597903-0000등록일: 2023-10-31
9.

제주마 종 판별을 위한 유전자 마커 조성물 및 이를 이용한 제주마 종 판별 방법

출원번호: 10-2021-0018093출원일: 2021-02-09등록번호: 10-2447490-0000등록일: 2022-09-21
8.

이동성 유전인자 LINE-1 키메릭 전사체를 이용한 암 판별용 바이오마커 조성물

출원번호: 10-2020-0020328출원일: 2020-02-19등록번호: 10-2342198-0000등록일: 2021-12-17
7.

이동성 유전인자 SINE 선택적 발굴을 위한 HiSeq 시퀀서 기반의 DNA 라이브러리 제작 방법

출원번호: 10-2019-0063834출원일: 2019-05-30등록번호: 10-2102107-0000등록일: 2020-04-13
4.

비교유전체 방법을 이용한 한우 및 홀스테인 품종 판별용 분자 마커 조성물

출원번호: 10-2018-0096852출원일: 2018-08-20등록번호: 10-2012596-0000등록일: 2019-08-13
5.

이동성 유전인자 LINE-1(L1HS) 선택적 발굴을 위한 HiSeq 시퀀서 기반의 DNA 라이브러리 제작 방법

출원번호: 10-2018-0037207출원일: 2018-03-30등록번호: 10-2024581-0000등록일: 2019-09-18
6.

이동성 유전인자 LINE-1(L1HS) 선택적 발굴을 위한 Ion PGM 시퀀서 기반의 DNA 라이브러리 제작 방법

출원번호: 10-2018-0037208출원일: 2018-03-30등록번호: 10-2027310-0000등록일: 2019-09-25
3.

비교유전체 방법을 이용한 재래닭, 청계, 레그호온 품종 판별용 분자 마커 조성물

출원번호: 10-2016-0132158출원일: 2016-10-12등록번호: 10-1849235-0000등록일: 2018-04-10
1.

자살벡터를 이용하여 다제내성 균주의 변이주를 제작하는 방법

출원번호: 10-2014-0115545출원일: 2014-09-01등록번호: 10-1685759-0000등록일: 2016-12-06
2.

다제내성 균주의 변이주 제작용 자살벡터

출원번호: 10-2014-0115540출원일: 2014-09-01등록번호: 10-1638690-0000등록일: 2016-07-05