Useful Web SIte

BLAT
OligoCalc
Oligo Analysis Tool
GC Content
Primer3
Primer3Plus
Giri
RepeatMasker
L1Xplorer
Idiographica
Kaviar
WebLogo
ECR Browser
InteractiVenn
Jvenn
TIMETREE
PaintOmics 3
DNA Duster
R-graph
bioDBnet
NetworkAnalyst
TCGA SpliceSeq
TSVdb
Clue
DGidb

Useful Program

Network
TREECON
PAUP
Bioedit
MrBayes
MEGA
Textpad

Bacterial Sequence Analysis

Bioinformatics Tool kit
In silico PCR amplification
Multilocus Sequence Typing

ETC

BLATCAT
Data Manipulation & Visualisation Using R
RNAseq analysis in R